Saleh Alkhalifa

Saleh AlkhalifaSaleh AlkhalifaSaleh Alkhalifa
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Saleh Alkhalifa

Saleh AlkhalifaSaleh AlkhalifaSaleh Alkhalifa

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Professional Experience

Amgen, Cambridge MA

Director of Data Science — Operations

June 2025 - Present

  • Cross-Functional AI Strategy: Lead the design and implementation of enterprise-scale AI solutions across manufacturing, quality, engineering, supply chain, and process development under the Continuous Improvement 2.0 initiative.
  • AI Agent Transformation: Spearhead the development and deployment of reusable AI agents to automate high-impact operational workflows, delivering measurable improvements in speed, efficiency, and decision-making accuracy.
  • Generative AI Integration: Operationalize GenAI across key functions using RAG pipelines, LLM orchestration, and domain-specific knowledge embeddings, improving document generation, risk analysis, and process optimization.
  • Business-Aligned AI Delivery: Align AI initiatives directly with operational KPIs and business outcomes, ensuring each solution contributes to cost savings, cycle time reduction, or quality improvement.
  • Agent Framework Leadership: Direct the architecture of multi-agent systems using OpenAI (GPT-4, GPT-o1), AWS Bedrock, and LangChain, enabling real-time, context-aware decision support tools across the enterprise.
  • AI Governance and Reusability: Establish scalable frameworks for AI governance, documentation standards, and model/component reuse across teams to accelerate delivery while maintaining compliance and quality.
  • Stakeholder Engagement & Strategic Vision: Collaborate with senior leadership to identify AI use cases, prioritize cross-functional needs, and drive the long-term roadmap for intelligent automation in operations.



Senior Manager of Data Science — OTDS Advanced Analytics

August 2022 - June 2025

  • Strategic Leadership in Generative AI Adoption: Spearheaded the operations strategy for the adoption and integration of generative AI, aligning cutting-edge technologies with organizational goals to drive innovation, enhance efficiency, and establish a competitive edge in AI-enabled solutions.
  • Driving Generative AI Innovation: Led a team of 10 data scientists and software engineers to develop and deploy scalable generative AI solutions, leveraging cutting-edge technologies like Python, Redis, AWS, Bedrock, OpenAI, LangChain, and Haystack. Delivered significant cost and time efficiencies by accelerating processes such as retrieval-augmented generation (RAG) and automated document creation.
  • AI-Enabled Business Applications: Owned and managed AI-Enabled RAG applications, enhancing information retrieval and enabling faster, more strategic decision-making.
  • Strategic NLP Development: Designed and implemented advanced deep learning and NLP models, transforming unstructured data into actionable insights that drive business strategy.
  • AI-Agent Framework Leadership: Designed and implemented advanced AI-Agent frameworks leveraging OpenAI’s GPT-4.0 and GPT-o1, enhancing traditional prompting techniques to deliver more context-aware and reliable outputs, significantly improving the accuracy and efficiency of existing models, enabling more precise decision-making and streamlined operational processes.
  • DevOps Modernization: Spearheaded the design of a DevOps framework on AWS, introducing CI/CD pipelines and Infrastructure as Code (IaC) to enhance deployment reliability and efficiency across development teams.
  • LLM Strategy Pioneer: Conducted early investigations into Large Language Model (LLM) applications, identifying high-impact opportunities to align AI-agent frameworks with organizational goals and operational strategies.
  • Documentation Automation: Developed AI-driven frameworks using OpenAI, HuggingFace, and LangChain, reducing documentation creation time by 30%.
  • Prompt Engineering Excellence: Innovated custom prompt-engineering techniques, achieving a 90% improvement in search and information retrieval reliability.
  • Regulatory Impact: Contributed to deep learning models with TensorFlow, improving regulatory model accuracy by up to 86%, ensuring compliance and operational efficiency.


Data Scientist — Operations Advanced Analytics

February 2020 - August 2022

  • AWS Administration & Best Practices: Assumed the role of AWS admin for the DIPT organization, implementing best practices to ensure compliance with IT policies and enhancing the security and efficiency of cloud operations.
  • Strategic Planning & Alignment: Developed roadmaps, defined measurable goals, and established key performance metrics to align analytics initiatives with Amgen’s operational objectives, fostering collaboration and inclusivity across teams.
  • AI & NLP Applications: Managed a team of three data scientists to design and implement innovative forecasting and natural language processing (NLP) solutions using AWS Textract and Comprehend, driving efficiency for the Process Development business unit.
  • NLP Tool Development: Led the creation of novel semantic search tools using Seq2Seq models, Transformers, and Classification algorithms, transitioning the organization from data-rich to decision-smart.
  • Collaborative Development: Partnered with cross-functional teams to deploy robust NLP applications, including Q&A systems, semantic search engines, and classification models, utilizing techniques like TFIDF, LSTM, and Transformers.
  • Demand Forecasting Impact: Developed and deployed advanced forecasting models (LSTM, ARIMA, PROPHET) to improve prediction accuracy and reduce inventory costs, contributing to operational efficiency and cost savings.
  • Scaling NLP with AWS Sagemaker: Established best practices for scaling NLP models within Amgen using AWS Sagemaker, improving data discoverability and ensuring data integrity across millions of healthcare documents.
  • Team Coaching & Project Management: Coached team members on effective project management and communication strategies, ensuring stakeholder requirements were met within tight deadlines while maintaining high-quality deliverables.


Sr. Associate Data Scientist — Digital Integration and Predictive Technologies

June 2019 - February 2020

  • Team Leadership: Managed a team of two data scientists, driving the development of forecasting and NLP applications to address critical challenges for the Process Development business unit.
  • Competitor Intelligence Platform: Designed and implemented a business intelligence monitoring system to analyze health-related content in competitor intellectual property filings, providing actionable insights for internal strategy formulation.
  • Automated Metrics Reporting: Built and deployed a platform that automated the tracking and reporting of technical and business metrics for senior leadership, enhancing decision-making with real-time insights.
  • Innovative Anomaly Detection: Engineered a patent-pending multivariate statistical method for anomaly detection, achieving 94% accuracy, significantly improving the reliability of predictive systems.
  • Model Validation Excellence: Led the development of Standard Operating Procedures (SOPs) for model validation, ensuring consistency, compliance, and robustness in machine learning applications.
  • Collaboration for Production Deployment: Partnered with software engineers to validate and transition machine learning models from research to production, ensuring scalability and operational efficiency.


Associate Data Scientist — Process Development

November 2017 - June 2019

  • Machine Learning for API Development: Leveraged machine learning techniques to identify optimal API method development conditions, addressing unmet scientific and operational needs.
  • Advanced Predictive Modeling: Built a timeseries forecasting model for instrument LCAP with 88% accuracy, reducing development timelines and enhancing resource planning.
  • Data-Driven Efficiency Analysis: Created SQL-based reports and machine learning models for instrument utilization and efficiency analysis, enabling data-informed decision-making.
  • Analytical Chemistry Expertise: Conducted API and impurity quantification using advanced techniques such as LCMS, NMR, and GC, contributing to the precision of product development.
  • Innovative Lab Practices: Introduced advanced electronic lab notebook strategies, improving the documentation and reproducibility of experimental workflows.

NovaLyse Biosolutions, Villanova PA

Laboratory Scientist, Minbiole Lab                                                                             

Aug 2015 - Aug 2017

  • Machine Learning for Chemical Prediction: Developed machine learning models and molecular dynamics (MD) simulations using Python, Keras, and RDKit to predict chemical properties, advancing data-driven insights for compound potency and efficacy.
  • Dataset Creation for QACs: Designed, synthesized, and analyzed hundreds of Quaternary Ammonium Compounds (QACs), building a comprehensive dataset to train machine learning models for classification and predictive analytics.
  • Simulation-Driven Potency Prediction: Developed MD simulation models to evaluate and predict QAC potency, enhancing the understanding of structure-activity relationships.
  • Scikit-Learn Applications: Applied scikit-learn machine learning techniques for compound classification, leveraging Python to drive computational chemical analysis.
  • Scalable Compound Production: Scaled up the synthetic production of QACs to kilogram quantities, supporting downstream applications and testing at a larger scale.
  • Advanced Analytical Techniques: Purified and characterized compounds using LCMS and NMR, ensuring high-quality results and reliable experimental outcomes.
  • Laboratory Data Management: Designed and implemented a laboratory database system, streamlining data organization, retrieval, and analysis to improve workflow efficiency and collaboration.

Temple University, Philadelphia PA

Research Collaborator, High Performance Computing                                                                          

Aug 2015 - Aug 2017

  • HPC-Enabled Machine Learning: Leveraged high-performance computing (HPC) clusters, including BlueWaters, to develop machine learning models for chemical potency prediction, accelerating computational workflows and enabling large-scale data analysis.
  • Molecular Simulations: Conducted NAMD simulations to explore the structural properties of pyridine-based ammonium salts, providing valuable insights into molecular behavior and interactions.
  • Data Trend Analysis: Applied machine learning algorithms, including KMeans, KNN, and Linear Regression, to identify trends and patterns in complex chemical datasets, enabling data-driven discoveries.
  • Automation with Python: Created Python scripts to automate HPC workflows, optimizing resource utilization and reducing manual intervention in computational processes.

https://www.linkedin.com/in/saleh-alkhalifa/

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